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WormBase Tree Display for Gene: WBGene00123535

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Name Class

WBGene00123535SMapS_parentSequenceCjap.Contig17545
IdentityVersion2
NameCGC_nameCjp-clec-265From_analysisInferred_from_orthology
Sequence_nameCJA04331
Molecular_nameCJA04331
CJA04331.1
JA41331
Public_nameCjp-clec-265
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:20WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-clec-265
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
RNASeq_FPKMWBls:000000446.5338From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:0000027320.877From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:0000038307.614From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
322.987From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
338.361From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004145.2661From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
45.922From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
47.0464From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
55.8049From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
59.3797From_analysisRNASeq.japonica.WBls:0000041.control_median
62.9545From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
65.6156From_analysisRNASeq.japonica.WBls:0000041.control_mean
81.911From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
89.8812From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
96.1384From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
WBls:0000101118.332From_analysisRNASeq.japonica.total_over_all_stages.control_mean
62.9545From_analysisRNASeq.japonica.total_over_all_stages.control_median
Ortholog (20)
ParalogWBGene00129425Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130112Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133278Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136887Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00176193Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00183733Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216850Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. Is an ortholog of C. elegans clec-265.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA04331
Corresponding_transcriptCJA04331.1
Other_sequenceCBC16675_1
CJC00970_1
Experimental_infoExpr_patternExpr1083200
Microarray_resultsGPL14145_CJA04331_613-672_0.936_7_C
GPL14145_CJA04331_806-865_0.954_1_B
GPL14145_CJA04331_973-1032_0.905_16_A
MethodGene