WormBase Tree Display for Gene: WBGene00123434

WBGene00123434 SMap: S_parent: Sequence: Cjap.Contig18062
  Identity: Version: 5
    Name: Sequence_name: CJA04228
      Molecular_name: CJA04228
        CJA04228.1
        JA66392
      Public_name: CJA04228
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-spo-11
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 08 May 2019 10:09:28 WBPerson1983 Name_change: CGC_name: Removed
        4 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Cjp-spo-11
        5 28 Jul 2021 11:12:30 WBPerson1983 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000004 52.4745 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 17.6244 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 12.9692 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        13.5744 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        14.1797 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 11.9947 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        19.6887 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        21.9104 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        27.3827 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        30.8894 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        37.9718 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        40.8963 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        7.66991 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        9.22324 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        9.2548 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
      WBls:0000101 14.1797 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        20.9639 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00190054
      00190055
      00190056
      00190057
      00190058
      00190059
      00190060
      00190061
    Ortholog (58)
    Paralog (35)
    Structured_description: Automated_description: Predicted to enable ATP binding activity; DNA binding activity; and DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity. Predicted to be involved in DNA metabolic process and regulation of DNA-templated transcription. Predicted to be located in chromosome and nucleus. Is an ortholog of C. elegans spo-11 and swsn-4. In C. elegans, spo-11 is involved in meiotic DNA double-strand break processing. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA04228
    Corresponding_transcript: CJA04228.1
    Other_sequence (58)
  Experimental_info: Expr_pattern: Expr1082275
      Expr1086460
    Microarray_results: GPL14145_CJA01850_116-175_0.940_1_A
      GPL14145_CJA01850_130-189_0.903_3_C
      GPL14145_CJA01850_87-146_0.920_2_B
      GPL14145_CJA04228_1001-1060_0.934_6_A
      GPL14145_CJA04228_752-811_0.905_20_C
      GPL14145_CJA04228_903-962_0.713_134_B
  Remark: [190507 pad] The CGC name Cjp-spo-11 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210728 pad] The CGC name Cjp-spo-11 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene