WormBase Tree Display for Gene: WBGene00119227

WBGene00119227 SMap: S_parent: Sequence: Cjap.Contig17021
  Identity: Version: 2
    Name: CGC_name: Cjp-cdh-3 From_analysis: Inferred_from_orthology
      Sequence_name: CJA00023
      Molecular_name: CJA00023
        CJA00023.1
        JA60918
      Public_name: Cjp-cdh-3
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:19 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cdh-3
        2 29 Jul 2011 11:13:36 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdh
    RNASeq_FPKM: WBls:0000004 14.6069 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 2.32365 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 1.68626 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        1.84047 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        1.99469 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.13995 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.142247 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        0.209999 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.210369 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.384326 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.557634 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.558282 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.951372 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.09084 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.15801 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
      WBls:0000101 0.951372 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        1.92866 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00186600
      00186601
      00186602
    Ortholog (20)
    Paralog (15)
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in membrane. Is an ortholog of C. elegans cdh-3. In C. elegans, cdh-3 is involved in basement membrane disassembly and nematode male tail tip morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA00023
    Corresponding_transcript: CJA00023.1
  Experimental_info: Expr_pattern: Expr1074255
    Microarray_results: GPL14145_CJA00023_6423-6482_0.809_100_C
      GPL14145_CJA00023_9863-9922_0.913_12_B
      GPL14145_CJA00023_9988-10047_0.964_1_A
  Method: Gene