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WormBase Tree Display for Gene: WBGene00118108

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Name Class

WBGene00118108SMapS_parentSequencePPA_ChrIII
IdentityVersion2
NameCGC_namePpa-rpl-9
Sequence_namePPA28554
Molecular_namePPA28554
PPA28554.1
PP62690
Other_nameGENEPREDICTION_SNAP300000085346
UMM-S112-3.36Person_evidenceWBPerson606
Public_namePpa-rpl-9
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
218 Nov 2010 11:54:47WBPerson2970Name_changeCGC_namePpa-rpl-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpl
RNASeq_FPKMWBls:0000032194.944From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101164.344From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
194.944From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
298.087From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00186115
00186116
00186117
00186118
Ortholog (31)
ParalogWBGene00276336Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Is an ortholog of C. elegans rpl-9. In C. elegans, rpl-9 is involved in determination of adult lifespan.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA28554
Corresponding_transcriptPPA28554.1
Other_sequence (362)
Experimental_infoMicroarray_resultsGPL14372_Probes_66065
GPL14372_Probes_66067
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041606:PP_X.nematophila_regulated
MethodGene