WormBase Tree Display for Gene: WBGene00117869

WBGene00117869 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 5
    Name: CGC_name: Ppa-vab-2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA28315
      Molecular_name: PPA28315
        PPA28315.1
        PP55879
      Other_name: GENEPREDICTION_SNAP300000086732
        UMM-S10-81.16 Person_evidence: WBPerson606
      Public_name: Ppa-vab-2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:07 WBPerson4055 Event: Imported: from NGASP
        2 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        3 08 May 2019 10:09:22 WBPerson1983 Name_change: CGC_name: Ppa-vab-2
        4 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:27 WBPerson1983 Name_change: CGC_name: Ppa-vab-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vab
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        26.7749 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        8.92497 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00186005
    Ortholog (26)
    Paralog: WBGene00094625 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00104419 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans vab-2. In C. elegans, vab-2 is involved in ephrin receptor signaling pathway and epidermis morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA28315
    Corresponding_transcript: PPA28315.1
    Other_sequence: Acan_isotig11532
  Experimental_info: Microarray_results: GPL14372_Probes_59241
    Expression_cluster: WBPaper00041207:PP_dauer_up
  Remark: [190208 pad] The CGC name Ppa-vab-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-vab-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene