WormBase Tree Display for Gene: WBGene00117789
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| WBGene00117789 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | Ppa-efhd-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA28235 | ||||||||
| Molecular_name | PPA28235 | ||||||||
| PPA28235.1 | |||||||||
| PP65449 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000086652 | ||||||||
| UMA-S10-77.5 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-efhd-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00204240 | ||||
| 3 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-efhd-1 | ||||
| 4 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-efhd-1 | ||||
| Acquires_merge | WBGene00204240 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | efhd | ||||||||
| RNASeq_FPKM | WBls:0000032 | 1.84512 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.61504 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00185966 | ||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Is an ortholog of C. elegans efhd-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA28235 | |||||||
| Corresponding_transcript | PPA28235.1 | ||||||||
| Other_sequence (33) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_58966 | |||||||
| GPL14372_Probes_58967 | |||||||||
| GPL14372_Probes_58969 | |||||||||
| GPL14372_Probes_58970 | |||||||||
| Remark | [210528 pad] The CGC name Ppa-efhd-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
