WormBase Tree Display for Gene: WBGene00114213
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| WBGene00114213 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | Ppa-lin-48 | Inferred_automatically | from gene merge | |||||
| Sequence_name | PPA24659 | ||||||||
| Molecular_name | PPA24659 | ||||||||
| PPA24659.1 | |||||||||
| PP69508 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000083322 | ||||||||
| GENEPREDICTION_SNAP300000083323 | |||||||||
| UMM-S379-1.38 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-lin-48 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-lin-48 | ||||
| 3 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00114214 | ||||
| Acquires_merge | WBGene00114214 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lin | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00116005 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00305076 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Zinc finger C2H2 superfamily; Zinc finger, C2H2 type; Ovo-like; and Zinc finger C2H2-type. Is an ortholog of C. elegans lin-48. In C. elegans, lin-48 is involved in anatomical structure morphogenesis and response to salt stress. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA24659 | |||||||
| Corresponding_transcript | PPA24659.1 | ||||||||
| Other_sequence (15) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_1206 | |||||||
| GPL14372_Probes_1207 | |||||||||
| GPL14372_Probes_1208 | |||||||||
| GPL14372_Probes_1210 | |||||||||
| GPL14372_Probes_1211 | |||||||||
| Method | Gene |
