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WormBase Tree Display for Gene: WBGene00113426

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Name Class

WBGene00113426SMapS_parentSequencePPA_ChrII
IdentityVersion1
NameCGC_namePpa-alh-6From_analysisInferred_from_orthology
Sequence_namePPA23872
Molecular_namePPA23872
PPA23872.1
PP68259
Other_nameGENEPREDICTION_SNAP300000080766
UMM-S245-2.45Person_evidenceWBPerson606
Public_namePpa-alh-6
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classalh
RNASeq_FPKMWBls:00000329.42409From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010111.132From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
6.85203From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
9.42409From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
Ortholog (35)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: ER membrane protein complex subunit 2-like; Tetratricopeptide repeat; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans alh-6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA23872
Corresponding_transcriptPPA23872.1
Other_sequence (18)
Experimental_infoMicroarray_resultsGPL14372_Probes_85522
GPL14372_Probes_85523
GPL14372_Probes_85526
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
MethodGene