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WormBase Tree Display for Gene: WBGene00112260

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Name Class

WBGene00112260SMapS_parentSequencePPA_ChrII
IdentityVersion1
NameCGC_namePpa-mig-5From_analysisInferred_from_orthology
Sequence_namePPA22706
Molecular_namePPA22706
PPA22706.1
PP71900
Other_nameGENEPREDICTION_SNAP300000079447
UMS-S10-93.71Person_evidenceWBPerson606
Public_namePpa-mig-5
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmig
RNASeq_FPKMWBls:000003228.0093From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010128.0093From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
30.0099From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
62.0204From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00183595
00183596
Ortholog (29)
ParalogWBGene00202774Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in Wnt signaling pathway and intracellular signal transduction. Is an ortholog of C. elegans mig-5. In C. elegans, mig-5 is involved in several processes, including cell differentiation; inductive cell migration; and non-canonical Wnt signaling pathway.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA22706
Corresponding_transcriptPPA22706.1
Other_sequence (18)
Experimental_infoMicroarray_resultsGPL14372_Probes_64178
GPL14372_Probes_64179
GPL14372_Probes_64180
GPL14372_Probes_64181
GPL14372_Probes_64182
GPL14372_Probes_64183
GPL14372_Probes_64184
GPL14372_Probes_64186
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
ReferenceWBPaper00025001
WBPaper00025296
WBPaper00025297
WBPaper00026652
MethodGene