WormBase Tree Display for Gene: WBGene00111105

WBGene00111105 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 1
    Name: CGC_name: Ppa-mec-3 From_analysis: Inferred_from_orthology
      Sequence_name: PPA21551
      Molecular_name: PPA21551
        PPA21551.1
        PP70116
      Other_name: GENEPREDICTION_SNAP300000078297
        UMM-S2838-40.55 Person_evidence: WBPerson606
      Public_name: Ppa-mec-3
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mec
    RNASeq_FPKM: WBls:0000032 21.6417 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        7.2139 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00183016
    Ortholog: WBGene00003167 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
      WBGene00030186 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
      WBGene00073459 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
      WBGene00150907 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
      WBGene00127225 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans mec-3. In C. elegans, mec-3 is involved in several processes, including mechanosensory behavior; neuron projection organization; and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA21551
    Corresponding_transcript: PPA21551.1
    Other_sequence: Acan_isotig04039
      Tcol_isotig18359
      Tcir_isotig22868
      Tcir_isotig12826
      Oden_isotig22305
      EY459924.1
      Dviv_isotig17581
      ACC18695_1
      Acan_isotig04038
      Dviv_isotig17580
  Experimental_info: Microarray_results: GPL14372_Probes_20577
      GPL14372_Probes_20578
      GPL14372_Probes_20579
      GPL14372_Probes_20580
    Expression_cluster: WBPaper00041207:PP_dauer_up
  Method: Gene