WormBase Tree Display for Gene: WBGene00105809
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| WBGene00105809 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-dpy-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA16255 | ||||||||
| Molecular_name | PPA16255 | ||||||||
| PPA16255.1 | |||||||||
| PP64208 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000072972 | ||||||||
| GENEPREDICTION_SNAP300000072973 | |||||||||
| UMM-S273-12.28 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-dpy-2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00105810 | ||||
| 3 | 08 May 2019 10:09:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-dpy-2 | ||||
| 5 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-dpy-2 | ||||
| Acquires_merge | WBGene00105810 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpy | ||||||||
| RNASeq_FPKM | WBls:0000032 | 15.1733 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 8.31579 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 9.77407 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00180478 | ||||||||
| Ortholog (32) | |||||||||
| Paralog (148) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans dpy-10 and dpy-2. In C. elegans, dpy-2 is involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle; post-embryonic body morphogenesis; and regulation of growth. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA16255 | |||||||
| Corresponding_transcript | PPA16255.1 | ||||||||
| Other_sequence (39) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_25457 | |||||||
| GPL14372_Probes_25458 | |||||||||
| GPL14372_Probes_25459 | |||||||||
| GPL14372_Probes_25460 | |||||||||
| GPL14372_Probes_25461 | |||||||||
| GPL14372_Probes_79557 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| WBPaper00041466:PP_S.marcescens_regulated | |||||||||
| Remark | [190507 pad] The CGC name Ppa-dpy-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [200204 pad] The CGC name Ppa-dpy-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
