WormBase Tree Display for Gene: WBGene00102637
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WBGene00102637 | SMap | S_parent | Sequence | PPA_ChrV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | PPA13083 | |||||||
Molecular_name | PPA13083 | ||||||||
PPA13083.1 | |||||||||
PP66980 | |||||||||
Other_name | GENEPREDICTION_SNAP300000069563 | ||||||||
UMM-S60-7.36 | Person_evidence | WBPerson606 | |||||||
Public_name | PPA13083 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
RNASeq_FPKM | WBls:0000032 | 0.655859 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0.21862 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
Ortholog (116) | |||||||||
Paralog (57) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; Zinc finger C2H2-type; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Is an ortholog of C. elegans clec-41; clec-42; and clec-43. In C. elegans, clec-41 is involved in positive regulation of chemotaxis. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA13083 | |||||||
Corresponding_transcript | PPA13083.1 | ||||||||
Experimental_info | Microarray_results | GPL14372_Probes_1551 | |||||||
GPL14372_Probes_1552 | |||||||||
GPL14372_Probes_1553 | |||||||||
GPL14372_Probes_1554 | |||||||||
GPL14372_Probes_1555 | |||||||||
GPL14372_Probes_38438 | |||||||||
GPL14372_Probes_38439 | |||||||||
GPL14372_Probes_38440 | |||||||||
GPL14372_Probes_38441 | |||||||||
Method | Gene |