WormBase Tree Display for Gene: WBGene00101807
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WBGene00101807 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | Sequence_name | PPA12253 | |||||||
Molecular_name (3) | |||||||||
Other_name | GENEPREDICTION_SNAP300000068703 | ||||||||
UMS-S233-11.50 | Person_evidence | WBPerson606 | |||||||
Public_name | PPA12253 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 18 Nov 2010 11:54:48 | WBPerson2970 | Name_change | CGC_name | Ppa-col-182 | ||||
3 | 28 Jul 2021 11:12:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
28.8401 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
9.61337 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
Ortholog (23) | |||||||||
Paralog (148) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Collagen triple helix repeat and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans col-182 and col-75. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA12253 | |||||||
Corresponding_transcript | PPA12253.1 | ||||||||
Other_sequence (44) | |||||||||
Experimental_info | Expression_cluster | WBPaper00064862:Ppa-sul-2(tu1069)_4M1_Up | |||||||
Remark | [210728 pad] The CGC name Ppa-col-182 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
Method | Gene |