WormBase Tree Display for Gene: WBGene00101443
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| WBGene00101443 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Identity | Version | 11 | ||||
| Name | CGC_name | Ppa-dnj-8 | From_analysis | Inferred_from_orthology | ||
| Sequence_name | PPA11889 | |||||
| Molecular_name | PPA11889 | |||||
| PPA11889.1 | ||||||
| PP60239 | ||||||
| Other_name | GENEPREDICTION_SNAP300000068334 | |||||
| GENEPREDICTION_SNAP300000068335 | ||||||
| GENEPREDICTION_SNAP300000068336 | ||||||
| GENEPREDICTION_SNAP300000068337 | ||||||
| GENEPREDICTION_SNAP300000068338 | ||||||
| UMM-S394-4.55 | Person_evidence | WBPerson606 | ||||
| Ppa-aipr-1 | From_analysis | Inferred_from_orthology | ||||
| Public_name | Ppa-dnj-8 | |||||
| Species | Pristionchus pacificus | |||||
| History | Version_change (11) | |||||
| Acquires_merge | WBGene00101444 | |||||
| WBGene00101445 | ||||||
| WBGene00101446 | ||||||
| WBGene00101447 | ||||||
| Status | Live | |||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | dnj | |||||
| RNASeq_FPKM | WBls:0000032 | 8.81087 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
| RNASeq.pristionchus.WBls:0000032.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
| WBls:0000101 | 15.954 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||
| RNASeq.pristionchus.WBls:0000101.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
| 8.25496 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||
| 8.81087 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
| Ortholog (52) | ||||||
| Paralog | WBGene00090610 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||
| WBGene00103200 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
| WBGene00106787 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
| WBGene00109466 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
| WBGene00118166 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
| WBGene00274627 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
| WBGene00275617 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
| WBGene00284484 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
| WBGene00304694 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Protein of unknown function (DUF974); NAC A/B domain superfamily; Thioredoxin; Tetratricopeptide repeat; DnaJ domain; Trafficking protein particle complex subunit 13; Tetratricopeptide-like helical domain superfamily; Thioredoxin domain; Transcription factor BTF3; Chaperone J-domain superfamily; NAC domain; Nascent polypeptide-associated complex NAC domain; and Thioredoxin-like superfamily. Is an ortholog of C. elegans dnj-8. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | PPA11889 | ||||
| Corresponding_transcript | PPA11889.1 | |||||
| Other_sequence (298) | ||||||
| Experimental_info | Microarray_results (16) | |||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | |||||
| WBPaper00041466:PP_germline-ablation_regulated | ||||||
| WBPaper00041606:PP_X.nematophila_regulated | ||||||
| Remark | [190208 pad] The CGC name Ppa-dnj-8 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
| [210528 pad] The CGC name Ppa-dnj-8 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
| Method | Gene |
