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WormBase Tree Display for Gene: WBGene00099848

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Name Class

WBGene00099848SMapS_parentSequencePPA_ChrIII
IdentityVersion2
NameCGC_namePpa-sly-1From_analysisInferred_from_orthology
Sequence_namePPA10294
Molecular_namePPA10294
PPA10294.1
PP61771
Other_nameGENEPREDICTION_SNAP300000066829
UMM-S341-5.92Person_evidenceWBPerson606
Public_namePpa-sly-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
207 Jun 2016 16:56:40WBPerson2970Name_changeCGC_namePpa-sly-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsly
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010114.9153From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.97177From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00177960
Ortholog (34)
ParalogWBGene00115057Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117349Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273338Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273414Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276554Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans sly-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA10294
Corresponding_transcriptPPA10294.1
Other_sequence (39)
Experimental_infoMicroarray_resultsGPL14372_Probes_66298
GPL14372_Probes_66299
GPL14372_Probes_66300
GPL14372_Probes_66301
GPL14372_Probes_66302
GPL14372_Probes_66303
GPL14372_Probes_66304
MethodGene