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WormBase Tree Display for Gene: WBGene00099480

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Name Class

WBGene00099480SMapS_parentSequencePPA_ChrIII
IdentityVersion2
NameCGC_namePpa-nhl-2From_analysisInferred_from_orthology
Sequence_namePPA09926
Molecular_namePPA09926
PPA09926.1
PP51767
Other_nameGENEPREDICTION_SNAP300000066461
GENEPREDICTION_SNAP300000066463
UMA-S112-25.28Person_evidenceWBPerson606
Public_namePpa-nhl-2
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00099482
Acquires_mergeWBGene00099482
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhl
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00177863
Ortholog (30)
ParalogWBGene00116453Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118077Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275016Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278490Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable zinc ion binding activity. Is an ortholog of C. elegans nhl-2. In C. elegans, nhl-2 is involved in positive regulation of development, heterochronic; protein localization to cell cortex; and regulation of establishment of cell polarity.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA09926
Corresponding_transcriptPPA09926.1
Other_sequenceJI165920.1
Experimental_infoMicroarray_resultsGPL14372_Probes_28227
GPL14372_Probes_28229
MethodGene