WormBase Tree Display for Gene: WBGene00096460
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| WBGene00096460 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-ncs-3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA06906 | ||||||||
| Molecular_name | PPA06906 | ||||||||
| PPA06906.1 | |||||||||
| PP53803 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000064293 | ||||||||
| GENEPREDICTION_SNAP300000064294 | |||||||||
| UMA-S139-21.27 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-ncs-3 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00096461 | ||||
| 3 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-ncs-3 | ||||
| Acquires_merge | WBGene00096461 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ncs | ||||||||
| RNASeq_FPKM | WBls:0000032 | 11.0353 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 5.97815 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 6.89915 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00176464 | ||||||||
| 00176465 | |||||||||
| 00176466 | |||||||||
| 00176467 | |||||||||
| 00176468 | |||||||||
| 00176469 | |||||||||
| Ortholog (17) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to enable ABC-type transporter activity; ATP hydrolysis activity; and ion binding activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans ncs-3. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA06906 | |||||||
| Corresponding_transcript | PPA06906.1 | ||||||||
| Other_sequence (52) | |||||||||
| Experimental_info | Microarray_results (11) | ||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Remark | [191001 pad] The CGC name Ppa-ncs-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
