WormBase Tree Display for Gene: WBGene00091970

WBGene00091970 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 2
    Name: CGC_name: Ppa-bas-1 Paper_evidence: WBPaper00053031
      Sequence_name: PPA02416
      Molecular_name: PPA02416
        PPA02416.1
        PP63218
      Other_name: GENEPREDICTION_SNAP300000060077
        UMM-S50-11.0 Person_evidence: WBPerson606
      Public_name: Ppa-bas-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 02 Oct 2017 21:24:51 WBPerson2970 Name_change: CGC_name: Ppa-bas-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: bas
    RNASeq_FPKM: WBls:0000032 9.01396 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 2.66125 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        3.89174 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00174244
      00174245
      00174246
      00174247
      00174248
    Ortholog (67)
    Paralog: WBGene00090305 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096395 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098516 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110779 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114297 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00118138 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278826 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304750 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable carboxy-lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in amino acid metabolic process. Is an ortholog of C. elegans bas-1 and basl-1. In C. elegans, bas-1 is involved in several processes, including locomotion involved in locomotory behavior; phenol-containing compound biosynthetic process; and reproductive behavior. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA02416
    Corresponding_transcript: PPA02416.1
    Other_sequence (40)
  Experimental_info: Microarray_results: GPL14372_Probes_41305
      GPL14372_Probes_41306
      GPL14372_Probes_41307
      GPL14372_Probes_41308
      GPL14372_Probes_41309
      GPL14372_Probes_41311
      GPL14372_Probes_41312
    Expression_cluster: WBPaper00041207:PP_dauer_down
      WBPaper00041606:PP_X.nematophila_regulated
  Reference: WBPaper00053031
  Method: Gene