WormBase Tree Display for Gene: WBGene00090060
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| WBGene00090060 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | Ppa-cec-3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA00506 | ||||||||
| Molecular_name | PPA00506 | ||||||||
| PPA00506.1 | |||||||||
| PP66266 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057636 | ||||||||
| GENEPREDICTION_SNAP300000076072 | |||||||||
| UMM-S10-13.2 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-cec-3 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 30 Sep 2011 16:49:21 | WBPerson2970 | Name_change | CGC_name | Ppa-cec-3 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00108813 | ||||
| Acquires_merge | WBGene00108813 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cec | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 1.28192 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 3.84577 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (60) | |||||||||
| Paralog | WBGene00282961 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Histidine kinase/HSP90-like ATPase superfamily and Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. Is an ortholog of C. elegans cec-3. In C. elegans, cec-3 is involved in negative regulation of gene expression. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA00506 | |||||||
| Corresponding_transcript | PPA00506.1 | ||||||||
| Other_sequence | FG347532.1 | ||||||||
| PP01943 | |||||||||
| FG584363.1 | |||||||||
| PPC02432_1 | |||||||||
| PP02108 | |||||||||
| JI176568.1 | |||||||||
| FG353952.1 | |||||||||
| PPC02218_1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_57983 | |||||||
| GPL14372_Probes_82224 | |||||||||
| Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
| Method | Gene |
