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WormBase Tree Display for Gene: WBGene00089489

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Name Class

WBGene00089489SMapS_parentSequencecb25.fpc0829
IdentityVersion1
NameSequence_nameCBG28075
Molecular_nameCBG28075
CBG28075.1
CBP33383
Other_nameCBG_28075Accession_evidenceNDBHE601041
Public_nameCBG28075
DB_infoDatabaseNDBlocus_tagCBG_28075
SpeciesCaenorhabditis briggsae
HistoryVersion_change123 Jul 2008 11:20:50WBPerson1847EventImportednGASP new gene
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.333992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.732943From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.51793From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.48685From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.978541From_analysisRNASeq.briggsae.WBls:0000002.control_median
1.22414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.44448From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.35075From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
2.70151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.88532From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.09906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
2.18085From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.44518From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (11)
WBls:00000270.290676From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.872029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.199553From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.317784From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.399105From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.00287From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.245594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0.43857From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.53396From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.62935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.1331From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.21889From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.370842From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.600622From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.63796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.666965From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.69597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.697715From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.672019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.683994From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.712878From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.20276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.86034From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.9104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.05171From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.11666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.22293From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.916258From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.08419From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.19585From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.63796From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.79466From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.683994From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.90695From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00044156Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00058494Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00163255Caenorhabditis brenneriFrom_analysisInparanoid_8
CSP26.g18595Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP40.g3961Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-Y66C5A.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
FL83_01628Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025706Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_X0148900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g20583Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans Y66C5A.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG28075
Corresponding_transcriptCBG28075.1
Experimental_infoExpr_patternExpr1060644
Microarray_resultsGPL14143_CBG28075_8-67_0.867_7_B
GPL14143_CBG28075_134-193_0.928_2_A
GPL14143_CBG28075_187-246_0.938_1_C
MethodGene