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WormBase Tree Display for Gene: WBGene00088321

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Name Class

WBGene00088321SMapS_parentSequencecb25.fpc0024
IdentityVersion1
NameSequence_nameCBG26907
Molecular_nameCBG26907
CBG26907.1
CBP07161
Other_nameCBG_26907Accession_evidenceNDBHE601420
Public_nameCBG26907
DB_infoDatabaseNDBlocus_tagCBG_26907
SpeciesCaenorhabditis briggsae
HistoryVersion_change123 Jul 2008 11:20:50WBPerson1847EventImportednGASP new gene
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000022.71071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.99702From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.51241From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.76794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
4.64017From_analysisRNASeq.briggsae.WBls:0000002.control_median
4.70008From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.80924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000033.00771From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.06966From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.13162From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.34409From_analysisRNASeq.briggsae.WBls:0000003.control_mean
3.89295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000042.16144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.03879From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.91614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
11.8357From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
2.96695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.09037From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.59412From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000271.89512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.0293From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.47889From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.51224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.77077From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.49099From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.5273From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000357.96319From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.78636From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.51889From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.92594From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.25142From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.66598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.078227From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.081767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.150992From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.220218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.515598From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.68218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.702114From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.760457From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.18401From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.31634From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.22831From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.14155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.190258From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.0293From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.29682From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.27806From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.79554From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00172849
00172850
00172851
00172852
Ortholog (93)
ParalogWBGene00024732Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028216Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028219Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028247Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028398Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032089Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038550Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041797Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041801Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041804Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG26907
Corresponding_transcriptCBG26907.1
Other_sequence (11)
Experimental_infoExpr_patternExpr1053432
Microarray_resultsGPL8303_CB6_WBGene00024732_A
GPL14143_CBG01507_1-60_0.860_14_A
MethodGene