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WormBase Tree Display for Gene: WBGene00087295

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Name Class

WBGene00087295SMapS_parentSequencecb25.fpc2234
IdentityVersion1
NameSequence_nameCBG25881
Molecular_nameCBG25881
CBG25881.1
CBP48620
Other_nameCBG_25881Accession_evidenceNDBHE601459
Public_nameCBG25881
DB_infoDatabaseNDBlocus_tagCBG_25881
SpeciesCaenorhabditis briggsae
HistoryVersion_change123 Jul 2008 11:20:50WBPerson1847EventImportednGASP new gene
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000026.14104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.60833From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.77867From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.90529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
11.8095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.84198From_analysisRNASeq.briggsae.WBls:0000002.control_median
7.90863From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.266607From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.295538From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.324468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.197025From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.41076From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.821521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.264238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.449866From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.494382From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.669191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271.15443From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.38209From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
2.0812From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.73164From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.81328From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.78983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000353.10906From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000382.45301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.94793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.97203From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.07222From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.19651From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.29066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004110.5029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.10415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.09754From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.10321From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.10887From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
6.20336From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.9433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
14.1623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.80588From_analysisRNASeq.briggsae.WBls:0000041.control_median
8.65318From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000632.7215From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.57678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.76829From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.5268From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.58979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
9.97763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.17904From_analysisRNASeq.briggsae.WBls:0000063.control_median
5.57368From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.80811From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.93237From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.10415From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.08453From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.31525From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00172710
00172711
Ortholog (29)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans Y71H2AM.12.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG25881
Corresponding_CDS_historyCBG25881:bp263
Corresponding_transcriptCBG25881.1
Other_sequenceHBC07912_1
EX914914.1
Oden_isotig20645
Acan_isotig16644
HBC02622_1
Hbac_isotig04343
Oden_isotig20760
EX910644.1
EX912613.1
Experimental_infoExpr_patternExpr1059381
Microarray_resultsGPL14143_CBG25881_100-159_0.939_2_A
GPL14143_CBG25881_188-247_0.936_3_B
GPL14143_CBG25881_278-337_0.953_1_C
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene