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WormBase Tree Display for Gene: WBGene00087292

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Name Class

WBGene00087292SMapS_parentSequencecb25.fpc2234
IdentityVersion3
NameSequence_nameCBG25878
Molecular_nameCBG25878
CBG25878.1
CBP43561
Other_nameCBG_25878Accession_evidenceNDBHE601459
Public_nameCBG25878
DB_infoDatabaseNDBlocus_tagCBG_25878
SpeciesCaenorhabditis briggsae
HistoryVersion_change123 Jul 2008 11:20:50WBPerson1847EventImportednGASP new gene
208 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameCbr-dod-6.1
308 May 2019 10:09:28WBPerson1983Name_changeCGC_nameRemoved
428 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-dod-6.1
528 Jul 2021 11:12:30WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002101.997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.93464From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
63.6533From_analysisRNASeq.briggsae.WBls:0000002.control_mean
85.0281From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
20.5159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
52.772From_analysisRNASeq.briggsae.WBls:0000002.control_median
52.8689From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.298515From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
10.294From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
20.2895From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
9.18476From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
9.92426From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004103.79From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
87.2097From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
95.4998From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
100.431From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
103.065From_analysisRNASeq.briggsae.WBls:0000004.control_mean
104.407From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
119.488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027220.479From_analysisRNASeq.briggsae.WBls:0000027.control_mean
43.0463From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
528.954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
89.4352From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
309.195From_analysisRNASeq.briggsae.WBls:0000027.control_median
349.998From_analysisRNASeq.briggsae.WBls:0000027.control_mean
738.556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003575.8052From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038101.449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
118.971From_analysisRNASeq.briggsae.WBls:0000038.control_mean
292.808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
31.9081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
49.7211From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
75.5851From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004110.3475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
10.645From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.7692From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.1909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
15.2718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
5.76985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
10.5868From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.3017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
9.63892From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006335.2355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
35.4711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
38.1964From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
44.0728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
49.3774From_analysisRNASeq.briggsae.WBls:0000063.control_mean
93.9113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
19.2286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
36.8338From_analysisRNASeq.briggsae.WBls:0000063.control_median
44.3526From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010149.7211From_analysisRNASeq.briggsae.total_over_all_stages.control_median
81.5673From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
46.8969From_analysisRNASeq.briggsae.total_over_all_stages.control_median
92.058From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
OrthologWBGene00011869Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00085206Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00085211Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00142088Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00193272Caenorhabditis brenneriFrom_analysisInparanoid_8
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans dod-6. In C. elegans, dod-6 is involved in pharyngeal gland morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG25878
Corresponding_CDS_historyCBG25878:bp255
Corresponding_transcriptCBG25878.1
Other_sequenceCRC06793_1
FD514181.1
CBC14050_1
CBC03828_1
CR04490
CSC01566_1
FD515453.1
Experimental_infoExpr_patternExpr1069366
Microarray_resultsGPL8303_CB6_WBGene00031322_A
GPL8303_CB6_WBGene00031322_B
GPL8303_CB6_WBGene00031322_C
GPL8303_CB6_WBGene00031322_D
GPL8303_CB6_WBGene00031322_E
GPL14143_CBG25878_30-89_0.478_11_B
GPL14143_CBG25878_122-181_0.905_2_C
GPL14143_CBG25878_127-186_0.967_1_A
Remark[190507 pad] The CGC name Cbr-dod-6.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210728 pad] The CGC name Cbr-dod-6.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene