WormBase Tree Display for Gene: WBGene00086562
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| WBGene00086562 | SMap | S_parent | Sequence | T02G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | T02G6.11 | |||||||
| Molecular_name | T02G6.11 | ||||||||
| T02G6.11.1 | |||||||||
| CE54006 | |||||||||
| Other_name | CELE_T02G6.11 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T02G6.11 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00086562 | |||||
| NDB | locus_tag | CELE_T02G6.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00086562|UniProtKB=B5BM42 | |||||||
| family | PTHR21503 | ||||||||
| NCBI | gene | 7040170 | |||||||
| RefSeq | protein | NM_001377645.2 | |||||||
| TREEFAM | TREEFAM_ID | TF343220 | |||||||
| TrEMBL | UniProtAcc | B5BM42 | |||||||
| UniProt_GCRP | UniProtAcc | B5BM42 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 18 Jul 2008 16:29:57 | WBPerson1983 | Event | Split_from | WBGene00011389 | ||
| 2 | 12 Feb 2010 17:04:37 | WBPerson1983 | Event | Acquires_merge | WBGene00077547 | ||||
| Acquires_merge | WBGene00077547 | ||||||||
| Split_from | WBGene00011389 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00083432 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
| WBGene00089532 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| WBGene00164629 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00150313 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| WBGene00152977 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| chrI_pilon.g2347 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (12) | |||||||||
| Structured_description | Automated_description | Enriched in NSM; Z1; and Z4 based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on RNA-seq and microarray studies. Is affected by six chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T02G6.11 | |||||||
| Corresponding_CDS_history | T02G6.11:wp212 | ||||||||
| T02G6.11:wp274 | |||||||||
| Corresponding_transcript | T02G6.11.1 | ||||||||
| Associated_feature | WBsf985398 | ||||||||
| WBsf1010794 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052240 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004110 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021228 | ||||||||
| Expr1040419 | |||||||||
| Expr1155866 | |||||||||
| Expr2005754 | |||||||||
| Expr2023968 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (56) | |||||||||
| Map_info | Positive | Positive_clone | T02G6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 10.728 | |||||||
| Method | Gene |
