WormBase Tree Display for Gene: WBGene00086558
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WBGene00086558 | SMap | S_parent | Sequence | F12E12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | F12E12.12 | |||||
Molecular_name | F12E12.12 | ||||||
Other_name | F12E12.b | Curator_confirmed | WBPerson1983 | ||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||
CELE_F12E12.12 | Accession_evidence | NDB | BX284602 | ||||
Public_name | F12E12.12 | ||||||
DB_info | Database | WormFlux | gene | WBGene00086558 | |||
NDB | locus_tag | CELE_F12E12.12 | |||||
NCBI | gene | 7040143 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0000336 | |||||
Allele (106) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00128761 | Caenorhabditis japonica | From_analysis | TreeFam | |||
WBGene00103819 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||
WBGene00106963 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||
WBGene00117152 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||
WBGene00113749 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||
WBGene00210998 | Caenorhabditis japonica | From_analysis | TreeFam | ||||
WBGene00120251 | Caenorhabditis japonica | From_analysis | TreeFam | ||||
WBGene00095818 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||
WBGene00106956 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||
Paralog (20) | |||||||
Structured_description | Automated_description | Enriched in several structures, including RIS; carbon dioxide sensory neurons; excretory system; male distal tip cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is affected by six chemicals including tryptophan; Sodium Chloride; and Rifampin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS_history | F12E12.12:wp274 | |||||
Corresponding_pseudogene | F12E12.12 | ||||||
Other_sequence (40) | |||||||
Associated_feature | WBsf649976 | ||||||
WBsf987366 | |||||||
Experimental_info | Expr_pattern | Expr1014148 | |||||
Expr1148384 | |||||||
Expr2002473 | |||||||
Expr2020691 | |||||||
Microarray_results | SMD_F12E12.B | ||||||
175885_at | |||||||
175888_at | |||||||
GPL14144_F12E12.12_598-657_0.943_1_A | |||||||
GPL19516_CGZ0015736 | |||||||
GPL21109_F12E12.12 | |||||||
GPL8304_CE_WBGene00044811_B | |||||||
Expression_cluster (63) | |||||||
Map_info | Positive | Positive_clone | F12E12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | II | -6.21652 | |||||
Method | Gene |