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WormBase Tree Display for Gene: WBGene00082505

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Name Class

WBGene00082505SMapS_parentSequenceCrem_Contig3
IdentityVersion1
NameSequence_nameCRE18763
Molecular_nameCRE18763
CRE18763.1
RP42746
Public_nameCRE18763
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000004200.324From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
212.105From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
223.886From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002747.8105From_analysisRNASeq.remanei.WBls:0000027.control_mean
48.9266From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
53.0342From_analysisRNASeq.remanei.WBls:0000027.control_median
57.1418From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
77.4176From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
7.75591From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003810.4713From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
23.025From_analysisRNASeq.remanei.WBls:0000038.control_mean
29.1331From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
29.4705From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041105.342From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
24.4996From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
27.1295From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
28.9499From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
56.4508From_analysisRNASeq.remanei.WBls:0000041.control_median
59.3436From_analysisRNASeq.remanei.WBls:0000041.control_mean
83.9517From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
86.1886From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:000010129.9219From_analysisRNASeq.remanei.total_over_all_stages.control_median
52.7686From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (33)
ParalogWBGene00062053Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: PH-like domain superfamily. Is an ortholog of C. elegans smk-1. In C. elegans, smk-1 is involved in several processes, including defense response to bacterium; negative regulation of mitotic DNA damage checkpoint; and response to radiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE18763
Corresponding_transcriptCRE18763.1
Other_sequenceCR06362
CRC03522_1
Dviv_isotig18169
SSC03617_1
Dviv_isotig18170
SS03413
JI164743.1
Experimental_infoExpr_patternExpr1103597
Microarray_resultsGPL14146_CRE18763_889-948_0.950_1_A
MethodGene