WormBase Tree Display for Gene: WBGene00077918

WBGene00077918 SMap: S_parent: Sequence: Crem_Contig0
  Identity: Version: 2
    Name: CGC_name: Cre-otpl-3 From_analysis: Inferred_from_orthology
      Sequence_name: CRE00114
      Molecular_name: CRE00114
        CRE00114.1
        RP42107
      Public_name: Cre-otpl-3
    Species: Caenorhabditis remanei
    History: Version_change: 1 03 Jul 2008 11:46:53 WBPerson4055 Event: Created
        2 04 Jul 2008 11:06:47 WBPerson4055 Name_change: CGC_name: Cre-otpl-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: otpl
    RNASeq_FPKM: WBls:0000004 0.18349 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        0.320924 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.458358 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 1.96183 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        2.34826 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        2.68862 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        2.73469 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        6.05796 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 1.1262 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        3.3471 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        4.08277 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        4.83233 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 1.29796 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        2.06439 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.49773 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.64815 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        2.7185 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.78885 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        2.99671 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        3.19034 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (11)
      WBls:0000101 1.91475 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.96658 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00169455
      00169456
      00169457
    Ortholog (26)
    Paralog: WBGene00053102 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053103 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053104 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053113 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00059177 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00074574 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00077253 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable proton channel activity. Predicted to be involved in proton transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans otpl-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE00114
    Corresponding_transcript: CRE00114.1
    Other_sequence: JO468562.1
      JI214198.1
  Experimental_info: Expr_pattern: Expr1110857
    Microarray_results: GPL14146_CRE00114_1221-1280_0.893_31_C
      GPL14146_CRE00114_1572-1631_0.945_6_B
      GPL14146_CRE00114_1677-1736_0.959_3_A
  Method: Gene