WormBase Tree Display for Gene: WBGene00077712
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| WBGene00077712 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nipi-4 | Paper_evidence | WBPaper00040946 | |||||
| Person_evidence | WBPerson168 | ||||||||
| Sequence_name | F40A3.5 | ||||||||
| Molecular_name | F40A3.5 | ||||||||
| F40A3.5.1 | |||||||||
| CE44387 | |||||||||
| F40A3.5.2 | |||||||||
| Other_name | CELE_F40A3.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nipi-4 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00077712 | |||||
| NDB | locus_tag | CELE_F40A3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00077712|UniProtKB=O16262 | |||||||
| family | PTHR24418 | ||||||||
| NCBI | gene | 179167 | |||||||
| RefSeq | protein | NM_072627.7 | |||||||
| SwissProt | UniProtAcc | O16262 | |||||||
| UniProt_GCRP | UniProtAcc | O16262 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 17 Apr 2008 15:19:53 | WBPerson2970 | Event | Created | |||
| 2 | 12 Apr 2012 16:26:47 | WBPerson2970 | Event | Acquires_merge | WBGene00018220 | ||||
| Name_change | Sequence_name | F40A3.5 | |||||||
| Acquires_merge | WBGene00018220 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nipi | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00021990 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (30) | |||||||||
| Paralog (47) | |||||||||
| Structured_description | Automated_description | Predicted to enable signaling receptor binding activity. Involved in defense response to fungus; positive regulation of gene expression; and response to wounding. Predicted to be extrinsic component of cytoplasmic side of plasma membrane. Expressed in hypodermis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40A3.5 | |||||||
| Corresponding_transcript | F40A3.5.1 | ||||||||
| F40A3.5.2 | |||||||||
| Other_sequence | OVC06001_1 | ||||||||
| JI177701.1 | |||||||||
| Hbac_isotig06783 | |||||||||
| HBC07886_1 | |||||||||
| FG972027.1 | |||||||||
| CJC02833_1 | |||||||||
| AW739486.1 | |||||||||
| Associated_feature | WBsf652805 | ||||||||
| WBsf1000538 | |||||||||
| WBsf1000539 | |||||||||
| WBsf1019962 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046811 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032005 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001329 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10001 | ||||||||
| Expr1040408 | |||||||||
| Expr1150686 | |||||||||
| Expr2014264 | |||||||||
| Expr2032504 | |||||||||
| Drives_construct | WBCnstr00014619 | ||||||||
| WBCnstr00014620 | |||||||||
| WBCnstr00023181 | |||||||||
| Construct_product | WBCnstr00014620 | ||||||||
| WBCnstr00020557 | |||||||||
| WBCnstr00020558 | |||||||||
| WBCnstr00023181 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction | WBInteraction000518452 | ||||||||
| WBInteraction000518453 | |||||||||
| WBInteraction000518454 | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Map | V | Position | 0.921767 | |||||
| Positive | Positive_clone | F40A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
