WormBase Tree Display for Gene: WBGene00077539
expand all nodes | collapse all nodes | view schema
| WBGene00077539 | SMap | S_parent | Sequence | Y52B11A | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | Sequence_name | Y52B11A.12 | ||||||||
| Molecular_name | Y52B11A.12 | |||||||||
| Y52B11A.12.1 | ||||||||||
| CE47590 | ||||||||||
| Other_name | CELE_Y52B11A.12 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | Y52B11A.12 | |||||||||
| DB_info | Database | NDB | locus_tag | CELE_Y52B11A.12 | ||||||
| Panther | gene | CAEEL|WormBase=WBGene00077539|UniProtKB=G8JLX0 | ||||||||
| family | PTHR21503 | |||||||||
| NCBI | gene | 13182023 | ||||||||
| RefSeq | protein | NM_001276559.3 | ||||||||
| TrEMBL | UniProtAcc | G8JLX0 | ||||||||
| UniProt_GCRP | UniProtAcc | G8JLX0 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 18 Jan 2008 15:19:40 | WBPerson1983 | Event | Created | ||||
| 2 | 04 Apr 2012 14:53:09 | WBPerson1983 | Event | Changed_class | Pseudogene | CDS | ||||
| 3 | 23 Apr 2012 17:35:05 | WBPerson1983 | Event | Changed_class | Pseudogene | CDS | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Allele (31) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (141) | ||||||||||
| Paralog (58) | ||||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplaapaaa; ABplaapaap; hyp3; interfacial epithelial cell; and rect_D based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and elt-2 based on RNA-seq and microarray studies. Is affected by eleven chemicals including mianserin; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | Y52B11A.12 | ||||||||
| Corresponding_transcript | Y52B11A.12.1 | |||||||||
| Corresponding_pseudogene_history | Y52B11A.12:wp231 | |||||||||
| Associated_feature | WBsf643719 | |||||||||
| WBsf643720 | ||||||||||
| WBsf656933 | ||||||||||
| WBsf656934 | ||||||||||
| WBsf656935 | ||||||||||
| Experimental_info | Expr_pattern | Expr1040397 | ||||||||
| Expr2007812 | ||||||||||
| Expr2026052 | ||||||||||
| Microarray_results | A_12_P142290 | |||||||||
| A_12_P142291 | ||||||||||
| GPL19516_CGZ0048776 | ||||||||||
| GPL21109_Y52B11A.12 | ||||||||||
| Expression_cluster (68) | ||||||||||
| Map_info | Positive | Positive_clone | Y52B11A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | I | 6.30362 | ||||||||
| Method | Gene |
