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WormBase Tree Display for Gene: WBGene00072109

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Name Class

WBGene00072109SMapS_parentSequenceCrem_Contig49
IdentityVersion3
NameCGC_nameCre-gon-1From_analysisInferred_from_orthology
Sequence_nameCRE29970
Molecular_nameCRE29970
CRE29970.1
RP40098
Other_namecr01.sctg310.wum.11
Public_nameCre-gon-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
229 Nov 2007 17:00:47WBPerson2970Name_changeCGC_nameCre-gon-1
303 Jul 2008 11:46:35WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29970
Other_namecr01.sctg310.wum.11
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgon
RNASeq_FPKMWBls:00000041.12255From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
1.16001From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.19747From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002712.7678From_analysisRNASeq.remanei.WBls:0000027.control_mean
15.3619From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
15.5503From_analysisRNASeq.remanei.WBls:0000027.control_median
15.7387From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
16.5329From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
3.43775From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:00000383.47148From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
6.24699From_analysisRNASeq.remanei.WBls:0000038.control_mean
7.59027From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
7.67921From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000410.772556From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.21896From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.23837From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.24027From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.26323From_analysisRNASeq.remanei.WBls:0000041.control_median
1.28619From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.39846From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
1.51381From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001013.14318From_analysisRNASeq.remanei.total_over_all_stages.control_median
4.41296From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00165933
00165934
00165935
00165936
00165937
Ortholog (40)
ParalogWBGene00051154Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00051296Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00051906Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00057941Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00059976Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00063218Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064749Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073282Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00076340Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00085051Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in extracellular matrix organization and proteolysis. Is an ortholog of C. elegans gon-1. In C. elegans, gon-1 is involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; muscle organ morphogenesis; and negative regulation of presynapse assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29970
Corresponding_transcriptCRE29970.1
Other_sequenceJI164015.1
Dviv_isotig32909
CBC09661_1
Hbac_isotig07485
Experimental_infoExpr_patternExpr1092411
Microarray_resultsGPL14146_CRE27943_704-763_0.918_6_C
GPL14146_CRE27943_893-952_0.924_4_A
MethodGene