WormBase Tree Display for Gene: WBGene00071540

WBGene00071540 SMap: S_parent: Sequence: Crem_Contig286
  Identity: Version: 3
    Name: CGC_name: Cre-tyr-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE25914
      Molecular_name: CRE25914
        CRE25914.1
        RP14127
      Other_name: cr01.sctg259.wum.1
      Public_name: Cre-tyr-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-tyr-1
        3 03 Jul 2008 11:46:32 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE25914
                Other_name: cr01.sctg259.wum.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tyr
    RNASeq_FPKM: WBls:0000004 0.382444 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.558665 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.734885 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 12.753 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        13.7505 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        13.9254 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        14.1003 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        18.1965 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.96477 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 10.9057 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        11.4923 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        12.5797 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        8.64494 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 11.9487 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        12.0843 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        14.9447 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        16.4945 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        17.5858 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        6.74727 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        7.78092 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        8.95261 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 (12)
      WBls:0000101 11.2888 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        12.0451 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00165513
    Ortholog (30)
    Paralog: WBGene00055858 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00056411 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00066580 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00067040 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00071827 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00058531 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00066133 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00069442 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00075127 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable oxidoreductase activity. Is an ortholog of C. elegans tyr-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE25914
    Corresponding_transcript: CRE25914.1
    Other_sequence (27)
  Experimental_info: Expr_pattern: Expr1101076
    Microarray_results: GPL14146_CRE25914_1138-1197_0.924_6_B
      GPL14146_CRE25914_1496-1555_0.926_5_A
      GPL14146_CRE25914_1661-1720_0.860_40_C
  Method: Gene