WormBase Tree Display for Gene: WBGene00071209

WBGene00071209 SMap: S_parent: Sequence: Crem_Contig20
  Identity: Version: 4
    Name: CGC_name: Cre-deb-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE12645
      Molecular_name: CRE12645
        CRE12645.1
        RP11632
      Other_name: cr01.sctg234.wum.11
        cr01.sctg234.wum.11.2
      Public_name: Cre-deb-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:47 WBPerson2970 Name_change: CGC_name: Cre-deb-1
        3 03 Jul 2008 11:46:31 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE12645
                Other_name: cr01.sctg234.wum.11
        4 03 Jul 2008 11:48:42 WBPerson4055 Event: Acquires_merge: WBGene00071210
              Name_change: Other_name: cr01.sctg234.wum.11.2
      Acquires_merge: WBGene00071210
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: deb
    RNASeq_FPKM: WBls:0000004 16.0593 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        17.8104 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        19.5614 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 140.868 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        169.409 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        171.254 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        173.099 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        175.652 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        45.3129 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 104.042 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        129.288 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        139.291 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        43.5461 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 19.3363 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        25.9342 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        27.6104 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        40.5811 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        41.283 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        53.5517 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        55.4294 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        65.8361 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 59.82 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        76.2777 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00165154
      00165155
      00165156
    Ortholog (34)
    Paralog: WBGene00052373 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00056408 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00083400 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable actin filament binding activity. Predicted to be involved in cell adhesion. Is an ortholog of C. elegans deb-1. In C. elegans, deb-1 is involved in positive regulation of ovulation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE12645
    Corresponding_transcript: CRE12645.1
    Other_sequence (96)
  Experimental_info: Expr_pattern: Expr1096801
    Microarray_results: GPL14146_CRE12645_2568-2627_0.922_10_C
      GPL14146_CRE12645_2797-2856_0.932_5_B
      GPL14146_CRE12645_2950-3009_0.951_1_A
  Method: Gene