WormBase Tree Display for Gene: WBGene00069160

WBGene00069160 SMap: S_parent: Sequence: Crem_Contig87
  Identity: Version: 3
    Name: CGC_name: Cre-nex-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29306
      Molecular_name: CRE29306
        CRE29306.1
        RP07037
      Other_name: cr01.sctg139.wum.1
      Public_name: Cre-nex-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-nex-1
        3 03 Jul 2008 11:46:24 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29306
                Other_name: cr01.sctg139.wum.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nex
    RNASeq_FPKM: WBls:0000004 28.5919 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        29.2035 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        29.8151 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 24.4659 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        42.437 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        46.8366 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        46.9758 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        47.115 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        51.3307 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 112.106 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        126.391 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        137.216 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        72.7122 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 224.753 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        234.221 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        240.266 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        246.589 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        247.865 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        255.463 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        258.418 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        266.414 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 167.287 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        201.98 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00163590
      00163591
    Ortholog (30)
    Paralog: WBGene00061775 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00055733 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00057985 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity and calcium-dependent phospholipid binding activity. Is an ortholog of C. elegans nex-1. In C. elegans, nex-1 is involved in engulfment of apoptotic cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29306
    Corresponding_transcript: CRE29306.1
    Other_sequence (107)
  Experimental_info: Expr_pattern: Expr1114223
    Microarray_results: GPL14146_CRE29306_172-231_0.914_3_B
      GPL14146_CRE29306_213-272_0.838_13_C
      GPL14146_CRE29306_591-650_0.818_20_A
  Method: Gene