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WormBase Tree Display for Gene: WBGene00068972

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Name Class

WBGene00068972SMapS_parentSequenceCrem_Contig541
IdentityVersion3
NameCGC_nameCre-pas-2From_analysisInferred_from_orthology
Sequence_nameCRE13798
Molecular_nameCRE13798
CRE13798.1
RP04615
Other_namecr01.sctg131.wum.35
Public_nameCre-pas-2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:28WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-pas-2
303 Jul 2008 11:46:23WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE13798
Other_namecr01.sctg131.wum.35
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpas
RNASeq_FPKMWBls:0000004538.897From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
548.062From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
557.226From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:0000027236.575From_analysisRNASeq.remanei.WBls:0000027.control_mean
274.168From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
284.52From_analysisRNASeq.remanei.WBls:0000027.control_median
294.872From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
317.896From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
59.363From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038188.017From_analysisRNASeq.remanei.WBls:0000038.control_mean
234.397From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
238.52From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
91.1342From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041216.202From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
237.84From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
265.957From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
292.355From_analysisRNASeq.remanei.WBls:0000041.control_median
293.94From_analysisRNASeq.remanei.WBls:0000041.control_mean
318.753From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
352.696From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
372.194From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:0000101217.291From_analysisRNASeq.remanei.total_over_all_stages.control_median
239.299From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00163426
00163427
00163428
00163429
Ortholog (30)
Paralog (14)
Structured_descriptionAutomated_descriptionPredicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be part of proteasome core complex, alpha-subunit complex. Is an ortholog of C. elegans pas-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE13798
Corresponding_transcriptCRE13798.1
Other_sequence (112)
Experimental_infoExpr_patternExpr1104573
Microarray_resultsGPL14146_CRE13798_238-297_0.935_3_C
GPL14146_CRE13798_266-325_0.848_36_B
GPL14146_CRE13798_461-520_0.698_63_A
MethodGene