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WormBase Tree Display for Gene: WBGene00068879

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Name Class

WBGene00068879SMapS_parentSequenceCrem_Contig262
IdentityVersion3
NameCGC_nameCre-trap-3From_analysisInferred_from_orthology
Sequence_nameCRE14326
Molecular_nameCRE14326
CRE14326.1
RP01922
CRE14326.2
Other_namecr01.sctg129.wum.5
Public_nameCre-trap-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:28WBPerson1847EventCreated
229 Nov 2007 17:00:46WBPerson2970Name_changeCGC_nameCre-trap-3
303 Jul 2008 11:46:23WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE14326
Other_namecr01.sctg129.wum.5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtrap
RNASeq_FPKMWBls:0000004420.307From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
427.695From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
435.084From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000271087.39From_analysisRNASeq.remanei.WBls:0000027.control_mean
1280.3From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
1304.69From_analysisRNASeq.remanei.WBls:0000027.control_median
1329.09From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
1411.86From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
328.308From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:00000381251.21From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
1360.47From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
345.454From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
985.711From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:0000041292.133From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
306.226From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
320.444From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
333.35From_analysisRNASeq.remanei.WBls:0000041.control_mean
333.55From_analysisRNASeq.remanei.WBls:0000041.control_median
346.656From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
350.849From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
383.792From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:0000101346.055From_analysisRNASeq.remanei.total_over_all_stages.control_median
519.586From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00163336
00163337
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to be involved in SRP-dependent cotranslational protein targeting to membrane. Predicted to be located in membrane. Is an ortholog of C. elegans trap-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE14326
Corresponding_transcriptCRE14326.1
CRE14326.2
Other_sequence (60)
Experimental_infoExpr_patternExpr1103975
Microarray_resultsGPL14146_CRE14326_15-74_0.854_16_C
GPL14146_CRE14326_270-329_0.898_9_B
GPL14146_CRE14326_297-356_0.950_1_A
MethodGene