WormBase Tree Display for Gene: WBGene00068316

WBGene00068316 SMap: S_parent: Sequence: Crem_Contig18
  Identity: Version: 3
    Name: CGC_name: Cre-nhr-76 From_analysis: Inferred_from_orthology
      Sequence_name: CRE11007
      Molecular_name: CRE11007
        CRE11007.1
        RP41847
      Other_name: cr01.sctg113.wum.7
      Public_name: Cre-nhr-76
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:46 WBPerson2970 Name_change: CGC_name: Cre-nhr-76
        3 03 Jul 2008 11:46:19 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE11007
                Other_name: cr01.sctg113.wum.7
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000004 0.328469 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.389809 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.451149 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.681833 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        2.82827 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        3.16278 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        3.37783 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        3.49729 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        6.50393 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 10.6714 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        1.32329 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        6.44938 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        7.35344 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 2.23322 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        2.31601 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.41313 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.51543 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.61774 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        2.72694 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.9825 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        3.79902 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 2.70521 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        3.88664 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00162826
      00162827
      00162828
      00162829
    Ortholog (32)
    Paralog (252)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-76. In C. elegans, nhr-76 is involved in positive regulation of fatty acid beta-oxidation by octopamine signaling pathway; positive regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway; and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE11007
    Corresponding_transcript: CRE11007.1
    Other_sequence: CJC14094_1
  Experimental_info: Expr_pattern: Expr1099803
      Expr1114162
    Microarray_results: GPL14146_CRE11007_1211-1270_0.911_14_B
      GPL14146_CRE11007_1485-1544_0.962_1_A
      GPL14146_CRE17793_1-60_0.774_3_B
      GPL14146_CRE17794_224-283_0.942_2_A
      GPL14146_CRE17794_466-525_0.934_5_B
  Method: Gene