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WormBase Tree Display for Gene: WBGene00063553

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Name Class

WBGene00063553SMapS_parentSequenceCrem_Contig33
IdentityVersion3
NameCGC_nameCre-clec-264From_analysisInferred_from_orthology
Sequence_nameCRE21231
Molecular_nameCRE21231
CRE21231.1
RP18743
Other_namecr01.sctg40.wum.41
Public_nameCre-clec-264
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-clec-264
303 Jul 2008 11:45:52WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE21231
Other_namecr01.sctg40.wum.41
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
RNASeq_FPKMWBls:00000042.60582From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
3.14948From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
3.69314From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000271.29064From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
4.04018From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
4.40061From_analysisRNASeq.remanei.WBls:0000027.control_mean
5.04263From_analysisRNASeq.remanei.WBls:0000027.control_median
6.04508From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
6.22652From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.373394From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
0.642617From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
1.23372From_analysisRNASeq.remanei.WBls:0000038.control_mean
2.68514From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000412.82784From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
2.88608From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
2.95953From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
4.02785From_analysisRNASeq.remanei.WBls:0000041.control_median
4.18806From_analysisRNASeq.remanei.WBls:0000041.control_mean
5.09617From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
5.6128From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
5.74591From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (11)
WBls:00001012.84487From_analysisRNASeq.remanei.total_over_all_stages.control_median
3.20932From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (44)
Paralog (59)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Is an ortholog of C. elegans clec-264. In C. elegans, clec-264 is involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE21231
Corresponding_transcriptCRE21231.1
Experimental_infoExpr_patternExpr1107416
Microarray_resultsGPL14146_CRE21231_853-912_0.950_1_A
MethodGene