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WormBase Tree Display for Gene: WBGene00063245

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Name Class

WBGene00063245SMapS_parentSequenceCrem_Contig45
IdentityVersion3
NameCGC_nameCre-let-2From_analysisInferred_from_orthology
Sequence_nameCRE27585
Molecular_nameCRE27585
CRE27585.1
RP42228
Other_namecr01.sctg37.wum.27
Public_nameCre-let-2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:50WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE27585
Other_namecr01.sctg37.wum.27
304 Jul 2008 11:06:44WBPerson4055Name_changeCGC_nameCre-let-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlet
RNASeq_FPKMWBls:000000431.1394From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
31.3897From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
31.64From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:0000027116.227From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
243.094From_analysisRNASeq.remanei.WBls:0000027.control_mean
270.237From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
277.828From_analysisRNASeq.remanei.WBls:0000027.control_median
285.419From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
300.493From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:0000038181.429From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
241.149From_analysisRNASeq.remanei.WBls:0000038.control_mean
265.62From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
276.399From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:0000041119.585From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
75.0365From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
86.0136From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
90.5378From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
92.6937From_analysisRNASeq.remanei.WBls:0000041.control_median
93.8725From_analysisRNASeq.remanei.WBls:0000041.control_mean
94.8497From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
97.2123From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:0000101165.143From_analysisRNASeq.remanei.total_over_all_stages.control_mean
171.435From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00158740
00158741
Ortholog (29)
Paralog (176)
Structured_descriptionAutomated_descriptionPredicted to be an extracellular matrix structural constituent. Predicted to be part of collagen trimer. Is an ortholog of C. elegans let-2. In C. elegans, let-2 is involved in several processes, including embryo development; gonad morphogenesis; and regulation of distal tip cell migration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE27585
Corresponding_transcriptCRE27585.1
Other_sequence (114)
Experimental_infoExpr_patternExpr1110573
Microarray_resultsGPL14146_CRE27585_3736-3795_0.750_57_B
GPL14146_CRE27585_3817-3876_0.958_1_A
GPL14146_CRE27585_521-580_0.682_109_C
MethodGene