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WormBase Tree Display for Gene: WBGene00063210

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Name Class

WBGene00063210SMapS_parentSequenceCrem_Contig50
IdentityVersion4
NameCGC_nameCre-nhr-1From_analysisInferred_from_orthology
Sequence_nameCRE03310
Molecular_nameCRE03310
CRE03310.1
RP29128
Other_namecr01.sctg36.wum.104
cr01.sctg36.wum.104.2
Public_nameCre-nhr-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-nhr-1
303 Jul 2008 11:45:50WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE03310
Other_namecr01.sctg36.wum.104
403 Jul 2008 11:48:44WBPerson4055EventAcquires_mergeWBGene00063211
Name_changeOther_namecr01.sctg36.wum.104.2
Acquires_mergeWBGene00063211
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000045.57686From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
5.96279From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
6.34872From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002711.8769From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
42.0649From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
47.7295From_analysisRNASeq.remanei.WBls:0000027.control_mean
48.0299From_analysisRNASeq.remanei.WBls:0000027.control_median
53.995From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
82.9812From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003822.8769From_analysisRNASeq.remanei.WBls:0000038.control_mean
27.2631From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
32.044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
9.32374From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004111.3241From_analysisRNASeq.remanei.WBls:0000041.control_mean
11.4918From_analysisRNASeq.remanei.WBls:0000041.control_median
14.8413From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
15.2594From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
15.5527From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
6.3528From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
7.7961From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
8.14239From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:000010115.0504From_analysisRNASeq.remanei.total_over_all_stages.control_median
21.6985From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00158702
00158703
00158704
00158705
Ortholog (30)
Paralog (273)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-1. In C. elegans, nhr-1 is involved in regulation of response to osmotic stress.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE03310
Corresponding_transcriptCRE03310.1
Other_sequence (41)
Experimental_infoExpr_patternExpr1105606
Microarray_resultsGPL14146_CRE03310_1011-1070_0.914_3_C
GPL14146_CRE03310_1187-1246_0.874_24_A
GPL14146_CRE03310_900-959_0.914_2_B
MethodGene