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WormBase Tree Display for Gene: WBGene00062517

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Name Class

WBGene00062517SMapS_parentSequenceCrem_Contig20
IdentityVersion3
NameCGC_nameCre-lin-3From_analysisInferred_from_orthology
Sequence_nameCRE12560
Molecular_nameCRE12560
CRE12560.1
RP27056
Other_namecr01.sctg32.wum.68
Public_nameCre-lin-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:47WBPerson2970Name_changeCGC_nameCre-lin-3
303 Jul 2008 11:45:46WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE12560
Other_namecr01.sctg32.wum.68
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
RNASeq_FPKMWBls:000000410.785From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
7.24192From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
9.01346From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:0000024 (53)
WBls:00000270.084548From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
1.24275From_analysisRNASeq.remanei.WBls:0000027.control_median
1.3648From_analysisRNASeq.remanei.WBls:0000027.control_mean
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
2.40095From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
2.97371From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:00000380.813307From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.78982From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.44289From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
4.11325From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004110.6712From_analysisRNASeq.remanei.WBls:0000041.control_median
12.0422From_analysisRNASeq.remanei.WBls:0000041.control_mean
16.5446From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
20.7679From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
21.5798From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
4.17353From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
4.38965From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
4.79785From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001013.77807From_analysisRNASeq.remanei.total_over_all_stages.control_median
5.45078From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (20)
ParalogWBGene00073765Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: EGF-like domain. Is an ortholog of C. elegans lin-3. In C. elegans, lin-3 is involved in several processes, including positive regulation of ovulation; positive regulation of vulval development; and reproductive process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE12560
Corresponding_transcriptCRE12560.1
Other_sequenceCR09820
CRC07071_1
Experimental_infoExpr_patternExpr1105660
Microarray_resultsGPL14146_CRE12560_1474-1533_0.952_1_A
MethodGene