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WormBase Tree Display for Gene: WBGene00060572

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Name Class

WBGene00060572SMapS_parentSequenceCrem_Contig11
IdentityVersion3
NameCGC_nameCre-csn-2From_analysisInferred_from_orthology
Sequence_nameCRE03956
Molecular_nameCRE03956
CRE03956.1
RP00141
Other_namecr01.sctg18.wum.213
Public_nameCre-csn-2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:42WBPerson2970Name_changeCGC_nameCre-csn-2
303 Jul 2008 11:45:33WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE03956
Other_namecr01.sctg18.wum.213
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcsn
RNASeq_FPKMWBls:0000004157.42From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
159.917From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
162.413From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002731.897From_analysisRNASeq.remanei.WBls:0000027.control_mean
3.2731From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
38.5126From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
39.0877From_analysisRNASeq.remanei.WBls:0000027.control_median
39.6629From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
46.1393From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003832.0092From_analysisRNASeq.remanei.WBls:0000038.control_mean
44.2422From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
44.3568From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
7.42854From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004148.5894From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
48.9654From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
51.9491From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
66.1427From_analysisRNASeq.remanei.WBls:0000041.control_mean
66.5912From_analysisRNASeq.remanei.WBls:0000041.control_median
81.2334From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
81.328From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
84.7909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010139.2467From_analysisRNASeq.remanei.total_over_all_stages.control_median
47.6679From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (40)
ParalogWBGene00055229Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00061631Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Proteasome component (PCI) domain; Winged helix DNA-binding domain superfamily; PCI domain; and COP9 signalosome complex subunit 2. Is an ortholog of C. elegans csn-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE03956
Corresponding_CDS_historyCRE03956:rp212
Corresponding_transcriptCRE03956.1
Other_sequence (67)
Experimental_infoExpr_patternExpr1098241
Microarray_resultsGPL14146_CRE03956_1128-1187_0.923_13_B
GPL14146_CRE03956_1245-1304_0.899_24_C
GPL14146_CRE03956_1496-1555_0.955_2_A
MethodGene