WormBase Tree Display for Gene: WBGene00060210

WBGene00060210 SMap: S_parent: Sequence: Crem_Contig24
  Identity: Version: 3
    Name: CGC_name: Cre-sel-12 From_analysis: Inferred_from_orthology
      Sequence_name: CRE17216
      Molecular_name: CRE17216
        CRE17216.1
        RP38354
      Other_name: cr01.sctg17.wum.95
      Public_name: Cre-sel-12
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-sel-12
        3 03 Jul 2008 11:45:31 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE17216
                Other_name: cr01.sctg17.wum.95
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sel
    RNASeq_FPKM: WBls:0000004 4.71788 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        5.04042 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        5.36297 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.158028 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        1.1427 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        1.86544 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.98976 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        2.58818 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.07014 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 0.640065 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        1.93806 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        2.1472 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        3.02692 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 4.99305 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        5.59375 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        5.75907 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        5.84488 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        5.93069 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        6.15995 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        6.96571 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        7.71745 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (11)
      WBls:0000101 1.89177 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        2.74142 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155676
      00155677
      00155678
    Ortholog (39)
    Paralog: WBGene00062380 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00067641 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00082190 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable aspartic endopeptidase activity, intramembrane cleaving. Predicted to be involved in protein processing. Predicted to be located in membrane. Is an ortholog of C. elegans sel-12. In C. elegans, sel-12 is involved in several processes, including apical protein localization; egg-laying behavior; and regulation of signal transduction. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE17216
    Corresponding_transcript: CRE17216.1
    Other_sequence (60)
  Experimental_info: Expr_pattern: Expr1110311
    Microarray_results: GPL14146_CRE17216_1109-1168_0.708_108_A
      GPL14146_CRE17216_368-427_0.575_153_B
      GPL14146_CRE17216_485-544_0.869_26_C
  Method: Gene