WormBase Tree Display for Gene: WBGene00059181

WBGene00059181 SMap: S_parent: Sequence: Crem_Contig18
  Identity: Version: 3
    Name: CGC_name: Cre-ced-5 From_analysis: Inferred_from_orthology
      Sequence_name: CRE11107
      Molecular_name: CRE11107
        CRE11107.1
        RP30810
      Other_name: cr01.sctg14.wum.38
      Public_name: Cre-ced-5
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:47 WBPerson2970 Name_change: CGC_name: Cre-ced-5
        3 03 Jul 2008 11:45:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE11107
                Other_name: cr01.sctg14.wum.38
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ced
    RNASeq_FPKM: WBls:0000004 6.47214 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        6.91535 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        7.35856 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.686713 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        10.0759 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        5.71183 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        5.77146 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        6.04235 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        6.31324 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 0.737073 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.62117 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.05271 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        4.07372 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 15.4284 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        16.0562 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        25.7265 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        27.4189 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        28.6823 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        4.60748 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        4.77189 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        5.13039 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 5.27988 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        7.29503 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00154696
      00154697
    Ortholog (32)
    Paralog: WBGene00051363 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00067681 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00067682 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072906 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00074085 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00075058 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in small GTPase mediated signal transduction. Is an ortholog of C. elegans ced-5. In C. elegans, ced-5 is involved in several processes, including left/right axis specification; positive regulation of distal tip cell migration; and vesicle-mediated transport. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE11107
    Corresponding_transcript: CRE11107.1
    Other_sequence (12)
  Experimental_info: Expr_pattern: Expr1093309
      Expr1111636
    Microarray_results: GPL14146_CRE11107_4658-4717_0.909_26_A
      GPL14146_CRE11107_4925-4984_0.902_36_C
      GPL14146_CRE11107_5233-5292_0.689_563_B
      GPL14146_CRE15027_1409-1468_0.947_3_C
      GPL14146_CRE15027_1424-1483_0.952_2_B
      GPL14146_CRE15027_1524-1583_0.954_1_A
  Method: Gene