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WormBase Tree Display for Gene: WBGene00058514

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Name Class

WBGene00058514SMapS_parentSequenceCrem_Contig27
IdentityVersion3
NameCGC_nameCre-nhr-3From_analysisInferred_from_orthology
Sequence_nameCRE15289
Molecular_nameCRE15289
CRE15289.1
RP20611
Other_namecr01.sctg12.wum.22
Public_nameCre-nhr-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-nhr-3
303 Jul 2008 11:45:19WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE15289
Other_namecr01.sctg12.wum.22
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000044.34254From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
4.40878From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
4.47503From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002717.9235From_analysisRNASeq.remanei.WBls:0000027.control_mean
18.7557From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
19.8599From_analysisRNASeq.remanei.WBls:0000027.control_median
20.9641From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
26.5967From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.37771From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003812.1657From_analysisRNASeq.remanei.WBls:0000038.control_mean
15.2291From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
15.4427From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
5.82527From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000413.7287From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
4.02293From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
4.88728From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
6.53679From_analysisRNASeq.remanei.WBls:0000041.control_mean
6.72187From_analysisRNASeq.remanei.WBls:0000041.control_median
8.55646From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
8.78897From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
9.23641From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:00001017.37357From_analysisRNASeq.remanei.total_over_all_stages.control_median
8.99024From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00153927
00153928
00153929
00153930
Ortholog (27)
Paralog (273)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE15289
Corresponding_transcriptCRE15289.1
Other_sequence (29)
Experimental_infoExpr_patternExpr1096409
Microarray_resultsGPL14146_CRE15289_202-261_0.849_43_B
GPL14146_CRE15289_318-377_0.872_29_A
GPL14146_CRE15289_774-833_0.852_40_C
MethodGene