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WormBase Tree Display for Gene: WBGene00058435

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Name Class

WBGene00058435SMapS_parentSequenceCrem_Contig15
IdentityVersion3
NameCGC_nameCre-sdn-1From_analysisInferred_from_orthology
Sequence_nameCRE07409
Molecular_nameCRE07409
CRE07409.1
RP02185
Other_namecr01.sctg11.wum.269
Public_nameCre-sdn-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-sdn-1
303 Jul 2008 11:45:18WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE07409
Other_namecr01.sctg11.wum.269
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsdn
RNASeq_FPKMWBls:000000495.6278From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
97.5241From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
99.4205From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002753.8712From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
60.5843From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
63.6101From_analysisRNASeq.remanei.WBls:0000027.control_median
65.0558From_analysisRNASeq.remanei.WBls:0000027.control_mean
66.6358From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
79.1319From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003837.655From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
45.1766From_analysisRNASeq.remanei.WBls:0000038.control_mean
48.0143From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
49.8605From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:000004119.4564From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
20.1189From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
20.5657From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
20.6131From_analysisRNASeq.remanei.WBls:0000041.control_mean
20.7632From_analysisRNASeq.remanei.WBls:0000041.control_median
20.9607From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
20.9646From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
21.6126From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:000010120.9874From_analysisRNASeq.remanei.total_over_all_stages.control_median
34.6134From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00153858
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans sdn-1. In C. elegans, sdn-1 is involved in embryo development; epidermis morphogenesis; and nematode larval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE07409
Corresponding_transcriptCRE07409.1
Other_sequence (17)
Experimental_infoExpr_patternExpr1100709
Microarray_resultsGPL14146_CRE07409_594-653_0.812_56_C
GPL14146_CRE07409_766-825_0.927_5_B
GPL14146_CRE07409_813-872_0.964_1_A
MethodGene