WormBase Tree Display for Gene: WBGene00058363

WBGene00058363 SMap: S_parent: Sequence: Crem_Contig15
  Identity: Version: 3
    Name: CGC_name: Cre-clc-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE07269
      Molecular_name: CRE07269
        CRE07269.1
        RP14153
      Other_name: cr01.sctg11.wum.199
      Public_name: Cre-clc-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:17 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE07269
                Other_name: cr01.sctg11.wum.199
        3 04 Jul 2008 11:06:38 WBPerson4055 Name_change: CGC_name: Cre-clc-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clc
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
            RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
            RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
      WBls:0000024 (53)
      WBls:0000027 14.3674 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        14.5199 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        19.8641 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        21.2027 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        7.22727 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        9.17575 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 25.6613 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        45.1491 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        50.7155 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        59.0705 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 22.8332 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        26.3966 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        31.2302 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        33.1142 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        33.1271 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        33.14 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        35.6923 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        36.2049 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 19.4468 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        20.8174 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (29)
    Paralog: WBGene00058411 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Tight junction protein, Claudin-like and Tight junction protein, claudin-like. Is an ortholog of C. elegans clc-1. In C. elegans, clc-1 is involved in defense response to Gram-positive bacterium; epithelial cell-cell adhesion; and innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE07269
    Corresponding_transcript: CRE07269.1
    Other_sequence: TDC02894_1
      CJC00700_1
      AM744860.1
      Dviv_isotig16777
      HC04882
      HCC06279_1
  Experimental_info: Expr_pattern: Expr1096940
    Microarray_results: GPL14146_CRE07269_116-175_0.921_5_A
      GPL14146_CRE07269_15-74_0.702_35_C
      GPL14146_CRE07269_368-427_0.947_1_B
  Method: Gene