WormBase Tree Display for Gene: WBGene00057660

WBGene00057660 SMap: S_parent: Sequence: Crem_Contig51
  Identity: Version: 3
    Name: CGC_name: Cre-nhx-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE04115
      Molecular_name: CRE04115
        CRE04115.1
        RP24528
      Other_name: cr01.sctg9.wum.384
      Public_name: Cre-nhx-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-nhx-2
        3 03 Jul 2008 11:45:13 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE04115
                Other_name: cr01.sctg9.wum.384
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhx
    RNASeq_FPKM: WBls:0000004 2.0723 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        2.07942 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.08654 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 21.2949 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        26.2393 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        26.3811 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        26.523 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        27.3024 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        5.11503 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 26.0867 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        36.2766 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        37.3796 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        4.60389 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 20.2214 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        22.9734 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        25.9326 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        26.5928 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        27.6737 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        29.4149 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        30.4008 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        30.6139 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 19.9843 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        20.6807 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00153151
      00153152
      00153153
      00153154
      00153155
      00153156
      00153157
      00153158
    Ortholog (40)
    Paralog: WBGene00051406 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053156 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00066338 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00075423 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00063693 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00058383 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00063270 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00058437 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00061261 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable sodium:proton antiporter activity. Predicted to be involved in proton transmembrane transport; regulation of pH; and sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans nhx-2. In C. elegans, nhx-2 is involved in several processes, including determination of adult lifespan; positive regulation of growth rate; and regulation of transport. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE04115
    Corresponding_transcript: CRE04115.1
    Other_sequence (20)
  Experimental_info: Expr_pattern: Expr1094683
    Microarray_results: GPL14146_CRE04115_1070-1129_0.900_8_C
      GPL14146_CRE04115_1140-1199_0.873_17_A
      GPL14146_CRE04115_994-1053_0.751_107_B
  Method: Gene