WormBase Tree Display for Gene: WBGene00056741

WBGene00056741 SMap: S_parent: Sequence: Crem_Contig2
  Identity: Version: 4
    Name: CGC_name: Cre-nhr-55 From_analysis: Inferred_from_orthology
      Sequence_name: CRE09222
      Molecular_name: CRE09222
        CRE09222.1
        RP44193
      Other_name: cr01.sctg7.wum.242
        cr01.sctg7.wum.242.2
      Public_name: Cre-nhr-55
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:07 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE09222
                Other_name: cr01.sctg7.wum.242
        3 03 Jul 2008 11:48:41 WBPerson4055 Event: Acquires_merge: WBGene00056742
              Name_change: Other_name: cr01.sctg7.wum.242.2
        4 04 Jul 2008 11:06:37 WBPerson4055 Name_change: CGC_name: Cre-nhr-55
      Acquires_merge: WBGene00056742
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000004 0.057878 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.115756 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.676366 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        1.24328 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        1.34228 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        2.0082 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        2.28854 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.141581 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.89335 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.915 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        4.62348 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 2.23144 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        2.69728 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.69998 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        3.12388 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        3.13522 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.57045 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        3.71956 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        3.8246 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 1.90744 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        2.16675 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00152322
      00152323
      00152324
      00152325
    Ortholog (61)
    Paralog (251)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-55. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE09222
    Corresponding_transcript: CRE09222.1
    Other_sequence: CSC00143_1
      CRC12055_1
      FD514389.1
  Experimental_info: Expr_pattern: Expr1106980
    Microarray_results: GPL14146_CRE09222_1023-1082_0.914_17_B
      GPL14146_CRE09222_1075-1134_0.961_1_A
      GPL14146_CRE09222_839-898_0.902_24_C
  Method: Gene