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WormBase Tree Display for Gene: WBGene00056672

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Name Class

WBGene00056672SMapS_parentSequenceCrem_Contig2
IdentityVersion3
NameCGC_nameCre-nhr-56From_analysisInferred_from_orthology
Sequence_nameCRE09183
Molecular_nameCRE09183
CRE09183.1
RP12726
Other_namecr01.sctg7.wum.176
Public_nameCre-nhr-56
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-nhr-56
303 Jul 2008 11:45:05WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE09183
Other_namecr01.sctg7.wum.176
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000040.575044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
0.586267From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.59749From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000270From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
2.36191From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
2.44263From_analysisRNASeq.remanei.WBls:0000027.control_mean
2.73777From_analysisRNASeq.remanei.WBls:0000027.control_median
3.11362From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
4.29498From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.146097From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
3.0948From_analysisRNASeq.remanei.WBls:0000038.control_mean
4.01817From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
5.12014From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000411.70065From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.79291From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.86767From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
2.17328From_analysisRNASeq.remanei.WBls:0000041.control_median
2.28754From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.47889From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
2.90987From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
2.97523From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (11)
WBls:00001012.4204From_analysisRNASeq.remanei.total_over_all_stages.control_median
2.56303From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00152244
00152245
00152246
00152247
Ortholog (21)
Paralog (251)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-56.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE09183
Corresponding_transcriptCRE09183.1
Experimental_infoExpr_patternExpr1104684
Microarray_resultsGPL14146_CRE09183_1040-1099_0.897_17_A
GPL14146_CRE09183_1191-1250_0.929_1_B
GPL14146_CRE09183_779-838_0.929_2_C
MethodGene