WormBase Tree Display for Gene: WBGene00056523

WBGene00056523 SMap: S_parent: Sequence: Crem_Contig2
  Identity: Version: 3
    Name: CGC_name: Cre-tni-3 From_analysis: Inferred_from_orthology
      Sequence_name: CRE09092
      Molecular_name: CRE09092
        CRE09092.1
        RP27244
      Other_name: cr01.sctg7.wum.30
      Public_name: Cre-tni-3
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-tni-3
        3 03 Jul 2008 11:45:05 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE09092
                Other_name: cr01.sctg7.wum.30
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tni
    RNASeq_FPKM: WBls:0000004 2.57798 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        2.58622 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        2.59445 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 26.4743 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        26.9943 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        31.914 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        36.8337 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        37.9629 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.10642 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 284.962 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        371.002 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        439.705 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        44.1796 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 277.384 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        318.287 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        480.932 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        587.411 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        628.128 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        66.1798 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        73.2338 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        73.8359 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 (12)
      WBls:0000101 102.051 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        262.547 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00152067
    Ortholog (33)
    Paralog: WBGene00058297 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00070603 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00064039 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00073643 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be part of troponin complex. Is an ortholog of C. elegans tni-3. In C. elegans, tni-3 is involved in egg-laying behavior; muscle contraction; and post-embryonic body morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE09092
    Corresponding_transcript: CRE09092.1
    Other_sequence (74)
  Experimental_info: Expr_pattern: Expr1113992
    Microarray_results: GPL14146_CRE09092_252-311_0.925_15_C
      GPL14146_CRE09092_355-414_0.924_16_B
      GPL14146_CRE09092_597-656_0.958_1_A
  Method: Gene